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Monitoring Genetic Defects

 

DNA marker tests provide new tools to more efficiently identify and monitor genetic defects.  The American Simmental Association`s Genetic Abnormality Policy is a scientifically based approach to managing and ultimately reducing the incidence of genetic abnormalities in our herds.  It leverages cutting-edge technology both from DNA testing and software development standpoint to identify and present information on the potential for an animal to carry genetic abnormalities.

 

Policy:

Sires and donor dams that fall into ASA’s carrier in lineage (CL-pink) or risk population categories (PR-yellow) must be tested before registration certificates and EPDs are available on new progeny.  If DNA is not available on a sire or donor dam in question, their progeny must be tested before registration certificates and EPDs are released.  No testing is required on dams of natural calves.

 

The results of the test do not impact eligibility for registration of the an animal or its calves.  The test requirement goes into effect when a DNA marker test becomes commericially available and the defect has been named by the Board of Trustees as a defect to be monitored.

 

Solutions Available to Meet Testing Requirements:

1.  Provide test result documentation from a lab, breed association or ASA approved source.

2.  If sire and/or donor dam has not been tested, complete required genetic testing.

3.  If sire and/or donor dam is not available for testing, complete required genetic testing on offspring.

 

The genetic defects for which DNA marker tests are available AND on which ASA is monitoring are listed in the table below in red.
Code Name DNA Marker Test Testing Required Tested Carriers Tested Free

Risk

Population

AL Albinism

not yet

       
AM Arthrogryposis Multiplex (curly calf) Yes Yes (List) (List)

Angus

DW1 Dwarfism (Angus) Yes        
FC Fawn Calf Syndrome not yet        
NH Neuropathic Hydrocephalus (hydro, water head) Yes
Yes (List) (List) Angus
HT Hypotrichosis (hairless) not yet        
IE Ideopathic Epilepsy not yet        
OS Osteopetrosis (marble bone) Yes Yes (List) (List)  
PHA Pulmonary Hypoplasia with Anasarca Yes Yes (List) (List) MA,CA,SS
PR Protoporphyria (photosensitivity)  not yet        
TH Tibial Hemimelia Yes Yes (List) (List) MA,CA,SS

 

ASA`s TraitTrac System: genetic defect monitoring made easy

 

ASA`s color coding system shows every animal`s current genetic defect status.  As information new information is added to ASA`s records the TraitTrac system autuomatically update the genetic status of an animal and its descendants. 


TraitTrac Color codes use to designate Genetic status of each defect
Color Code Description Testing Requirement
Green

TF

Tested Free

Tested Free of the genetic defect

none

Mid-green

PF

Pedigree Free

Pedigree Free (not tested).  All ancestors in question tested free (TF) of defect.  none
Light green

DF

Documented Free

Documented Free (not tested). Documented Free from another breed association or authorized source.  none
Jade

AF

Assumed Free

Assumed Free (not tested). No known carrier in lineage and less than 1/8 blood from a population with a significant incidence of the defect.  none
yellow

PR

Population  Risk

Population Risk (not tested). Has at least 1/8 blood from ancestors from a population with a significant incidence of the defect. Sires and donor cows must be tested before (additional) calves can be reported
Pink

CL

Carrier in Lineage

Carrier in Lineage (not tested). Has a carrier in pedigree without intermediary ancestor(s) Tested Free (TF). Sires and donor cows must be tested before (additional) calves can be reported
Red

TC

Tested Carrier

Tested Carrier of the genetic defect none

 

The genetic defect status for any animal can be viewed from the epd/pedigree display from Animal Search under Data Search.  In addition, herd summaries with genetic defect status are available from Reports under Herd Mgmt.  Keep in mind the only animals guaranteed to be free of an abnormality are those Tested Free (dark green) category.  For example, since animals color coded as Jade (AF) have not been tested there may by some risk they are carriers of a genetic defect. Also keep in mind that for untested animals the color coding system relies on the accuracy of pedigree records.


Please note: Some foundation registered animals that are registered in another breed association are coded as PR - yellow when more information from the originating breed association would show the animal is not from any effected lines of cattle.  These animals can be updated to a `DF` - light green status by getting acceptable documentation from the breed association. 

  

For more information about genetic defects see these links:

Genetic defects, ASA information page

   Congenital Defects in Cattle , Beef Cattle Handbook, Extension Beef Cattle Resource Committee.
  "Cowboy Genetics" - Written by Dr. Lana Kaiser and originally published in the 2006 May/June edition of the Maine-Anjou Voice
   Frequently Asked Questions